BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003B07LP1|AL425071
(987 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig702 1136 0.0
3x_Contig1641 679 0.0
>3x_Contig702
Length = 2831
Score = 1136 bits (569), Expect = 0.0
Identities = 577/585 (98%)
Strand = Plus / Plus
Query: 1 atcaagtgccaccgcctccagaggaaatagcgactcctagggtcagtagatctctaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2247 atcaagtgccaccgcctccagaggaaatagcgactcctagggtcagtagatctctaagaa 2306
Query: 61 aactcagamarmacaatcccgtagaaaatgaagttcagcaaagaccacagagagtcttac 120
|||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2307 aactcagacagcacaatcccgtagaaaatgaagttcagcaaagaccacagagagtcttac 2366
Query: 121 ggaatagagtttgaatattaattaaaggataacctaatcatagtaatgcgtggccatgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2367 ggaatagagtttgaatattaattaaaggataacctaatcatagtaatgcgtggccatgac 2426
Query: 181 atgtgtttatgagaagaaaactgataatagtgtaatatctaatatatgcatgtatatatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2427 atgtgtttatgagaagaaaactgataatagtgtaatatctaatatatgcatgtatatatg 2486
Query: 241 tatatgattgtmagaatagcgaaaattaatgccatcattgatatagcagtaaaatgtaaa 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2487 tatatgattgtaagaatagcgaaaattaatgccatcattgatatagcagtaaaatgtaaa 2546
Query: 301 taacaaaacaacgtaatagtacgcacttttcatttaagtgtttatgcaaaaggagcagcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2547 taacaaaacaacgtaatagtacgcacttttcatttaagtgtttatgcaaaaggagcagcc 2606
Query: 361 cgtgtccctttgctataatamactgaatagggacattattatgacaaaamataaccatat 420
|||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 2607 cgtgtccctttgctataataaactgaatagggacattattatgacaaaaaataaccatat 2666
Query: 421 ggtacagttcaaatgatttggcataaagataacactgtaacagtattattgatgttctat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2667 ggtacagttcaaatgatttggcataaagataacactgtaacagtattattgatgttctat 2726
Query: 481 tgtagttatagtacttgtacaatggggtcataatcaggaaagtgtgtgcgtttatgtgat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2727 tgtagttatagtacttgtacaatggggtcataatcaggaaagtgtgtgcgtttatgtgat 2786
Query: 541 agtmaatcaacgacaatgatgattgamgtagcagcgactggcgcc 585
||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2787 agtaaatcaacgacaatgatgattgaagtagcagcgactggcgcc 2831
>3x_Contig1641
Length = 13261
Score = 679 bits (340), Expect = 0.0
Identities = 357/362 (98%), Gaps = 1/362 (0%)
Strand = Plus / Minus
Query: 612 tacatgtctgacagtggtttgtaaagtagttttttmagtttttggttcttgataatggta 671
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 13261 tacatgtctgaaagtggtttgtaaagtagttttttaagtttttggttcttgataatggta 13202
Query: 672 ttaatacagacagtttatcatcaaacaatgtgcttgaatatcgtattcaaactaggcagt 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13201 ttaatacagacagtttatcatcaaacaatgtgcttgaatatcgtattcaaactaggcagt 13142
Query: 732 ggctgagttggcacttgcggtagtcgatggttttgtggtggttgaggagattgcgatgaa 791
|||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 13141 ggctgagttggcacttgcggtagtcgatggttatgtggtggttcaggagattgcgatgaa 13082
Query: 792 ttcggagtgaactggggcgtttgttcattactagcctgtgtttgaagaatttgcttcggt 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13081 ttcggagtgaactggggcgtttgttcattactagcctgtgtttgaagaatttgcttcggt 13022
Query: 852 acgctggcaggcatcctattgccataaaaagatgagttgttcacatcagaaatagttgga 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13021 acgctggcaggcatcctattgccataaaaagatgagttgttcacatcagaaatagttgga 12962
Query: 912 gaatggtctctcaaggaatgagcgtccggtg-aaacactggcgatctctcacgagcggaa 970
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 12961 gaatggtctctcaaggaatgagcgtccggtgaaaacactggcgatctctcacgagcggaa 12902
Query: 971 ga 972
||
Sbjct: 12901 ga 12900
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6542
Number of Sequences: 1807
Number of extensions: 6542
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 2
length of query: 987
length of database: 10,358,551
effective HSP length: 16
effective length of query: 971
effective length of database: 10,329,639
effective search space: 10030079469
effective search space used: 10030079469
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)